User contributions for Frodo
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27 February 2014
- 23:1623:16, 27 February 2014 diff hist +4 Welcome group members →When you leave the lab
- 23:1523:15, 27 February 2014 diff hist +177 Welcome group members →Good habits
- 23:1223:12, 27 February 2014 diff hist +638 Welcome web user No edit summary
- 23:0323:03, 27 February 2014 diff hist +331 Welcome group members No edit summary
- 22:5822:58, 27 February 2014 diff hist +1,770 Cluster 2 No edit summary
- 22:5722:57, 27 February 2014 diff hist −1,739 Welcome group members No edit summary
- 22:5622:56, 27 February 2014 diff hist +2,391 Cluster 0 No edit summary
- 22:5522:55, 27 February 2014 diff hist −2,531 Welcome group members No edit summary
- 22:5322:53, 27 February 2014 diff hist +119 Cluster 4 No edit summary
- 22:5022:50, 27 February 2014 diff hist +29 Cluster 1 No edit summary
- 22:4922:49, 27 February 2014 diff hist +7 Cluster 1 No edit summary
- 22:4922:49, 27 February 2014 diff hist +1,169 Cluster 1 No edit summary
- 22:4722:47, 27 February 2014 diff hist −1,172 Welcome group members No edit summary
- 22:4622:46, 27 February 2014 diff hist −26 Welcome group members No edit summary
- 22:4522:45, 27 February 2014 diff hist +556 Welcome group members No edit summary
- 22:4122:41, 27 February 2014 diff hist +22 Lab Security Policy No edit summary
- 22:2522:25, 27 February 2014 diff hist +68 Sysadmin No edit summary
- 22:1822:18, 27 February 2014 diff hist +1,396 N Cluster 2 Created page with "Our new cluster at UCSF is described on this page. The physical equipment in cluster Cluster 0 will be subsumed into this cluster when it replicates all the functions..."
- 22:0522:05, 27 February 2014 diff hist +18 Cluster 0 No edit summary
- 22:0422:04, 27 February 2014 diff hist +17 Cluster 1 No edit summary
- 21:3821:38, 27 February 2014 diff hist +21 m Using SGE cluster No edit summary
- 21:3721:37, 27 February 2014 diff hist +21 Cluster 3 No edit summary
- 21:3721:37, 27 February 2014 diff hist −18 Threaded Jobs on the Cluster No edit summary current
- 21:3621:36, 27 February 2014 diff hist −18 SGE Cluster Docking No edit summary current
- 21:3621:36, 27 February 2014 diff hist −18 Cluster 1 No edit summary
- 21:3621:36, 27 February 2014 diff hist −18 Cluster 0 No edit summary
- 21:3521:35, 27 February 2014 diff hist +21 Cluster Usage No edit summary
- 21:3521:35, 27 February 2014 diff hist +23 N UofT Cluster Frodo moved page UofT Cluster to Cluster 1: rationalization current
- 21:3521:35, 27 February 2014 diff hist 0 m Cluster 1 Frodo moved page UofT Cluster to Cluster 1: rationalization
- 21:3421:34, 27 February 2014 diff hist +23 N UCSF Cluster Frodo moved page UCSF Cluster to Cluster 0 current
- 21:3421:34, 27 February 2014 diff hist 0 m Cluster 0 Frodo moved page UCSF Cluster to Cluster 0
- 21:3421:34, 27 February 2014 diff hist −187 About our cluster No edit summary
25 February 2014
- 18:0218:02, 25 February 2014 diff hist +73 DOCK 3.7 →Molecular docking
- 18:0118:01, 25 February 2014 diff hist +26 DOCK 3.7 →Molecular docking
- 18:0018:00, 25 February 2014 diff hist +29 DOCK 3.7 →Molecular library preparation for docking
- 17:5617:56, 25 February 2014 diff hist +94 Running docking 3.7 No edit summary current
- 17:3417:34, 25 February 2014 diff hist +554 N Running docking 3.7 Created page with "To set up directories for docking using DOCK 3.7, use: setup_db2_lots.py <num_dirs> <prefix> /path/to/db2/files Then to start the docking using the queuing system sub..."
- 17:2817:28, 25 February 2014 diff hist +159 N Ligand preparation 3.7 Created page with "To build a db2 format database from SMILES for use by DOCK 3.7, use: build_smiles_ligand <smiles_file.smi> Return to DOCK 3.7 Category:Tutorial"
- 04:3704:37, 25 February 2014 diff hist +194 DOCK 3.7 →Highest level scripts
- 04:3404:34, 25 February 2014 diff hist −6 Blastermaster →Simple default usage
- 04:3304:33, 25 February 2014 diff hist +3,500 N OUTDOCK 3.7 Created page with " = Explanation of header = Here we explain line by line the meaning of the header in the OUTDOCK 3.7 file. DOCK v. 3.7, compiled 20140211 Version of program, date create..." current
- 04:2304:23, 25 February 2014 diff hist +36 DOCK 3.7 →Molecular docking
- 04:1604:16, 25 February 2014 diff hist +155 Getting started with DOCK 3.7 →Test 4. Dock custom library
- 03:1103:11, 25 February 2014 diff hist +139 Getting started with DOCK 3.7 No edit summary
- 00:5200:52, 25 February 2014 diff hist +10 DOCK 3.7 →Protein preparation for docking
- 00:5200:52, 25 February 2014 diff hist +266 DOCK 3.7 No edit summary
- 00:4900:49, 25 February 2014 diff hist +367 N Be blasti Created page with "be_blasti is a script to download a PDB entry, locate the receptor and ligand, and prepare other files for docking using blastermaster Author: Trent Balius, based on an o..."
- 00:3400:34, 25 February 2014 diff hist +41 Getting started with DOCK 3.7 No edit summary
- 00:1000:10, 25 February 2014 diff hist +42 OGS/GE No edit summary
- 00:1000:10, 25 February 2014 diff hist +33 Get a queuing system working No edit summary