Search results

Parameter Parser
[[Category:Manual]]

1 KB (168 words) - 04:05, 14 February 2014
DOCK Blaster:History
* 1982-1993: DOCK Blaster draws heavily upon the manual docking protocol developed in [[Tack Kuntz]]'s lab. * 1989-2000 Further refinements of the manual protocol in [[Brian Shoichet]]'s lab.

3 KB (381 words) - 20:02, 8 October 2012
Preparing the ligand
==Manual way==

5 KB (747 words) - 00:26, 17 January 2013
Output
[[Category:Manual]]

1 KB (168 words) - 04:01, 14 February 2014
Interacting with Chemaxon dataset
[[Category:Manual]]

1 KB (158 words) - 18:05, 15 February 2014
Category:Tutorials
...e handle in [[:Category:Theory |theory]] pages. We also offer [[:Category:Manual | manuals]], which attempt to explain specific programs, databases or websi

112 members (1 subcategory, 0 files) - 19:57, 3 August 2018
Docking Analysis in DOCK3.8
== Manual Install ==

5 KB (837 words) - 04:34, 3 March 2023
Ligand desolvation
...please see the [http://dock.compbio.ucsf.edu/DOCK_6/dock6_manual.htm DOCK6 manual].

1 KB (231 words) - 00:23, 25 May 2024
Identification of rigid segments
...nput molecule. Additional bonds may be specified as rigid by the user (see Manual Specification of Non-rotatable Bonds).

2 KB (239 words) - 20:27, 8 October 2012
Delphi electrostatics
...please see the [http://dock.compbio.ucsf.edu/DOCK_6/dock6_manual.htm DOCK6 manual].

2 KB (254 words) - 00:22, 25 May 2024
Coloring and Subcluster Matching
=== Manual way to modify colored matching spheres ===

8 KB (878 words) - 20:37, 12 April 2022
Blastermaster files
[[Category:Manual]]

2 KB (294 words) - 15:10, 25 March 2014
Sphere Matching
(2) Manual Matching —Specify the distance and node parameters, and DOCK will generat

2 KB (283 words) - 04:25, 14 February 2014
DOCK 3.6 User Manual
...from 1994: [http://wiki.bkslab.org/images/4/4e/Dock3_5refman.pdf DOCK 3.5 Manual] {LINK NO LONGER WORKING}

7 KB (721 words) - 22:17, 2 January 2019
Macromolecular Docking
# Flag to perform automated matching instead of manual matching

3 KB (357 words) - 18:05, 15 February 2014
Help:Disambiguation
* [[Wikipedia: Manual of Style/Disambiguation pages]]

3 KB (404 words) - 17:08, 12 March 2014
BKS lab Structure preparation
...CK Blaster pipeline. However there are some things that may still require manual intervention.

2 KB (395 words) - 12:42, 14 March 2014
Chemgrid
[[Category:Manual]]

3 KB (365 words) - 05:24, 13 March 2014
Orienting the Ligand
(2) Manual Matching —Specify the distance and node ...ng [yes] (yes, no):<br> # Flag to perform automated matching instead of manual matching

6 KB (996 words) - 23:44, 23 March 2016
DOCK 3.6
*[[DOCK 3.6 User Manual]]

2 KB (326 words) - 22:15, 2 January 2019

Search results

Navigation menu

Search